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All publications for Michael G. Campana

Armstrong, Ellie E. and Campana, Michael G. 2023. "RatesTools: a Nextflow pipeline for detecting de novo germline mutations in pedigree sequence data." Bioinformatics, 39, (1) btac784. https://doi.org/10.1093/bioinformatics/btac784..
Aardema, Matthew L., Campana, Michael G., Wagner, Nicole E., Ferreira, Francisco C., and Fonseca, Dina M. 2022. "A gene-based capture assay for surveying patterns of genetic diversity and insecticide resistance in a worldwide group of invasive mosquitoes." PLOS Neglected Tropical Diseases, 16, (8). https://doi.org/10.1371/journal.pntd.0010689..
Armstrong, Ellie E., Campana, Michael G., Solari, Katherine A., Morgan, Simon R., Ryder, Oliver A., Naude, Vincent N., Samelius, Gustaf, Sharma, Koustubh, Hadly, Elizabeth A., and Petrov, Dmitri A. 2022. "Genome report: chromosome-level draft assemblies of the snow leopard, African leopard, and tiger (Panthera uncia, Panthera pardus pardus, and Panthera tigris)." G3-Genes Genomes Genetics, 12, (12). https://doi.org/10.1093/g3journal/jkac277..
Campana, Michael G. and Armstrong, Ellie E. 2022. [Dataset] Test Dataset for 'RatesTools: a Nextflow pipeline for detecting de novo germline mutations in pedigree sequence data'. Distributed by National Zoo and Smithsonian Conservation Biology Institute. https://doi.org/10.25573/DATA.20250288.V2..
Fleischer, Robert C., Campana, Michael G., and James, Helen F. 2022. "Hawaiian songbird radiations." Current Biology, 32, (20) R1070–R1072. https://doi.org/10.1016/j.cub.2022.08.057..
Kearns, Anna M., Campana, Michael G., Slikas, Beth, Berry, Lainie, Saitoh, Takema, Cibois, Alice, and Fleischer, Robert C. 2022. "Conservation genomics and systematics of a near‐extinct island radiation." Molecular ecology, https://doi.org/10.1111/mec.16382..
Parker, Lillian D., Quinta, Jessica D., Rivera, Isabel, Cypher, Brian L., Kelly, Erica C., Campana, Michael G., Fleischer, Robert C., Boarman, Ryan, Boarman, William I., and Maldonado, Jesus E. 2022. "Genetic analyses are more sensitive than morphological inspection at detecting the presence of threatened Mojave desert tortoise (Gopherus agassizii) remains in canid scat and raven pellets." Conservation Science and Practice, https://doi.org/10.1111/csp2.12689..
Speer, Kelly A., Hawkins, Melissa T. R., Flores, Mary Faith C., McGowen, Michael R., Fleischer, Robert C., Maldonado, Jesús E., Campana, Michael G., and Muletz-Wolz, Carly. 2022. "A comparative study of RNA yields from museum specimens, including an optimized protocol for extracting RNA from formalin-fixed specimens." Frontiers in Ecology and Evolution, 10. https://doi.org/10.3389/fevo.2022.953131..
Campana, Michael G., Hawkins, Melissa T. R., and Caballero, Susana. 2021. "Assessing Biodiversity in the Phylogenomic Era." Frontiers in Ecology and Evolution, 9. https://doi.org/10.3389/fevo.2021.803188..
Cassin-Sackett, Loren, Campana, Michael G., McInerney, Nancy Rotzel, Lim, Haw Chuan, Przelomska, Natalia A. S., Masuda, Bryce, Chesser, R. Terry, Paxton, Eben H., Foster, Jeffrey T., Crampton, Lisa H., and Fleischer, Robert C. 2021. "Genetic structure and population history in two critically endangered Kaua'i honeycreepers." Conservation Genetics, https://doi.org/10.1007/s10592-021-01382-x..
Cortes-Rodriguez, Maria Nandadevi, Campana, Michael G., Berry, Lainie, Faegre, Sarah, Derrickson, Scott R., Ha, Renee Robinette, Dikow, Rebecca B., Rutz, Christian, and Fleischer, Robert C. 2021. [Dataset] Mariana Crow (Corvus kubaryi) genome assembly and annotation. Distributed by The Smithsonian Institution. https://doi.org/10.25573/DATA.13531016.V1..
Hunt, Harriet, V., Przelomska, Natalia A. S., Campana, Michael G., Cockram, James, Bligh, H. Frances J., Kneale, Catherine J., Romanova, Olga, I., Malinovskaya, Elena, V., and Jones, Martin K. 2021. "Population genomic structure of Eurasian and African foxtail millet landrace accessions inferred from genotyping-by-sequencing." Plant Genome, e20081–e20081. https://doi.org/10.1002/tpg2.20081..
Parker, Lillian D., Campana, Michael G., Quinta, Jessica D., Cypher, Brian, Rivera, Isabel, Fleischer, Robert C., Ralls, Katherine, Wilbert, Tammy R., Boarman, Ryan, Boarman, William I., and Maldonado, Jesús E. 2021. "An efficient noninvasive method for simultaneous species, individual, and sex identification of sympatric Mojave Desert canids via in-solution SNP capture." Authorea, https://doi.org/10.22541/au.162818800.02355889/v1..
Parker, Lillian D., Campana, Michael G., Quinta, Jessica D., Cypher, Brian, Rivera, Isabel, Fleischer, Robert C., Ralls, Katherine, Wilbert, Tammy R., Boarman, Ryan, Boarman, William, I., and Maldonado, Jesus E. 2021. "An efficient method for simultaneous species, individual, and sex identification via in-solution single nucleotide polymorphism capture from low-quality scat samples." Molecular Ecology Resources, https://doi.org/10.1111/1755-0998.13552..
Prado, Natalia A., Brown, Janine L., Zoller, Joseph A., Haghani, Amin, Yao, Mingjia, Bagryanova, Lora R., Campana, Michael G., Maldonado, Jesús E., Raj, Ken, Schmitt, Dennis, Robeck, Todd R., and Horvath, Steve. 2021. "Epigenetic clock and methylation studies in elephants." Aging Cell, https://doi.org/10.1111/acel.13414..
Videvall, Elin, Paxton, Kristina L., Campana, Michael G., Cassin-Sackett, Loren, Atkinson, Carter T., and Fleischer, Robert C. 2021. [Dataset] Transcriptome assembly and R code for "Transcriptome assembly and differential gene expression of the invasive avian malaria parasite Plasmodium relictum in Hawaiʻi". Distributed by The Smithsonian Institution. https://doi.org/10.25573/DATA.13611386..
Videvall, Elin, Paxton, Kristina L., Campana, Michael G., Cassin-Sackett, Loren, Atkinson, Carter T., and Fleischer, Robert C. 2021. "Transcriptome assembly and differential gene expression of the invasive avian malaria parasite Plasmodium relictum in HawaiModified Letter Turned Commai." Ecology and Evolution, https://doi.org/10.1002/ece3.7401..
Campana, Michael G., Corvelo, André, Shelton, Jennifer, Callicrate, Taylor E., Bunting, Karen L., Riley-Gillis, Bridget, Wos, Frank, DeGrazia, Justin, Jarvis, Erich D., and Fleischer, Robert C. 2020. "Adaptive Radiation Genomics of Two Ecologically Divergent Hawai'ian Honeycreepers: The 'akiapōlā'au and the Hawai'i 'amakihi." Journal of Heredity, 111, (1) 21–32. https://doi.org/10.1093/jhered/esz057..
Dommain, René, Andama, Morgan, McDonough, Molly M., Prado, Natalia A., Goldhammer, Tobias, Potts, Richard, Maldonado, Jesús E., Nkurunungi, John Bosco, and Campana, Michael G. 2020. "The Challenges of Reconstructing Tropical Biodiversity With Sedimentary Ancient DNA: A 2200-Year-Long Metagenomic Record From Bwindi Impenetrable Forest, Uganda." Frontiers in Ecology and Evolution, 8 Article 218. https://doi.org/10.3389/fevo.2020.00218..
Dommain, René, Andama, Morgan, McDonough, Molly M., Prado-Oviedo, Natalia A., Goldhammer, Tobias, Potts, Richard, Maldonado, Jesús E., Nkurunungi, John Bosco, and Campana, Michael. 2020. [Dataset] Supporting data for "The challenges of reconstructing tropical biodiversity with sedimentary ancient DNA: a 2200-year-long metagenomic record from Bwindi Impenetrable Forest, Uganda". Distributed by The Smithsonian Institution. https://doi.org/10.25573/DATA.10072625.V2..