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Publications

Abreu, Edson F., Pavan, Silvia E., Tsuchiya, Mirian T. N., McLean, Bryan S., Wilson, Don E., Percequillo, Alexandre R., and Maldonado, Jesus E. 2022. "Old specimens for old branches: Assessing effects of sample age in resolving a rapid Neotropical radiation of squirrels." Molecular phylogenetics and evolution, 175. https://doi.org/10.1016/j.ympev.2022.107576..
Ballou, Jonathan D., Lacy, Robert C., Traylor-Holzer, Kathy, Bauman, Karen, Ivy, Jamie A., and Asa, Cheryl. 2022. "Strategies for establishing and using genome resource banks to protect genetic diversity in conservation breeding programs." Zoo biology, https://doi.org/10.1002/zoo.21741..
Byerly, Paige A., Chesser, R. Terry, Fleischer, Robert C., McInerney, Nancy, Przelomska, Natalia A. S., and Leberg, Paul L. 2022. "Museum Genomics Provide Evidence for Persistent Genetic Differentiation in a Threatened Seabird Species in the Western Atlantic." Integrative and Comparative Biology, https://doi.org/10.1093/icb/icac107..
Camargo, Issac, Álvarez-Castañeda, Sergio Ticul, Polly, P. David, Stuhler, John D., Maldonado, Jesús E., and Esselstyn, Jacob. 2022. "Molecular phylogenetic and taxonomic status of the large-eared desert shrew Notiosorex evotis (Eulipotyphla: Soricidae)." Journal of mammalogy, https://doi.org/10.1093/jmammal/gyac069..
Castañeda-Rico, Susette, Edwards, Cody W., Hawkins, Melissa T. R., and Maldonado, Jesús E. 2022. "Museomics and the holotype of a critically endangered cricetid rodent provide key evidence of an undescribed genus." Frontiers in Ecology and Evolution, 10. https://doi.org/10.3389/fevo.2022.930356..
Castañeda-Rico, Susette, Maldonado, Jesús E., Dowler, Robert C., and Edwards, Cody W. 2022. "First mitochondrial genome of the Amazonian marsh rat Holochilus sciureus Wagner 1842 (Rodentia, Cricetidae, Sigmodontinae)." Mitochondrial DNA Part B-Resources, 7, (8) 1562–1564. https://doi.org/10.1080/23802359.2022.2107956..
Clark, Jonathan D., Benham, Phred M., Maldonado, Jesus E., Luther, David A., and Lim, Haw Chuan. 2022. "Maintenance of local adaptation despite gene flow in a coastal songbird." Evolution, https://doi.org/10.1111/evo.14538..
Ferreira, Francisco C., Videvall, Elin, Seidl, Christa M., Wagner, Nicole E., Kilpatrick, A. Marm, Fleischer, Robert C., and Fonseca, Dina M. 2022. "Transcriptional response of individual Hawaiian Culex quinquefasciatus mosquitoes to the avian malaria parasite Plasmodium relictum." Malaria Journal, 21, (1). https://doi.org/10.1186/s12936-022-04271-x..
Gooley, Rebecca M., Dicks, Kara L., Ferrie, Gina M., Lacy, Robert C., Ballou, Jonathan D., Callicrate, Taylor, Senn, Helen, Koepfli, Klaus-Peter, Edwards, Cody W., and Pukazhenthi, Budhan S. 2022. "Applying genomics to metapopulation management in North American insurance populations of southern sable antelope (Hippotragus niger niger) and addra gazelle (Nanger dama ruficollis)." Global Ecology and Conservation, 33. https://doi.org/10.1016/j.gecco.2021.e01969..
Jiménez, Randall R., Carfagno, Amy, Linhoff, Luke, Gratwicke, Brian, Woodhams, Douglas C., Chafran, Liana Soares, Bletz, Molly C., Bishop, Barney, and Muletz-Wolz, Carly R. 2022. "Inhibitory Bacterial Diversity and Mucosome Function Differentiate Susceptibility of Appalachian Salamanders to Chytrid Fungal Infection." Applied and Environmental Microbiology, 88, (8). https://doi.org/10.1128/aem.01818-21..
Kearns, Anna M., Campana, Michael G., Slikas, Beth, Berry, Lainie, Saitoh, Takema, Cibois, Alice, and Fleischer, Robert C. 2022. "Conservation genomics and systematics of a near‐extinct island radiation." Molecular ecology, https://doi.org/10.1111/mec.16382..
Kirchman, Jeremy J., McInerney, Nancy Rotzel, Giarla, Thomas C., Olson, Storrs L., Slikas, Elizabeth, and Fleischer, Robert C. 2022. "Corrigendum to: Phylogeny based on ultra-conserved elements clarifies the evolution of rails and allies (Ralloidea) and is the basis for a revised classification." Ornithology, 139, (1). https://doi.org/10.1093/ornithology/ukab065..
McDonough, Molly M., Ferguson, Adam W., Dowler, Robert C., Gompper, Matthew E., and Maldonado, Jesus E. 2022. "Phylogenomic systematics of the spotted skunks (Carnivora, Mephitidae, Spilogale): Additional species diversity and Pleistocene climate change as a major driver of diversification." Molecular phylogenetics and evolution, 167. https://doi.org/10.1016/j.ympev.2021.107266..
Mulder, Kevin P., Alarcon-Rios, Lucia, Nicieza, Alfredo G., Fleischer, Robert C., Bell, Rayna C., and Velo-Anton, Guillermo. 2022. "Independent evolutionary transitions to pueriparity across multiple timescales in the viviparous genus Salamandra." Molecular phylogenetics and evolution, 167. https://doi.org/10.1016/j.ympev.2021.107347..
Novaes, Roberto Leonan M., Claudio, Vinicius C., Carrion-Bonilla, Carlos, Abreu, Edson F., Wilson, Don E., Maldonado, Jesus E., and Weksler, Marcelo. 2022. "Erratum to Variation in the Myotis keaysi complex (Chiroptera, Vespertilionidae), with description of a new species from Ecuador(Dec, 10.1093/jmammal/gyab139, 2021)." Journal of mammalogy, 103, (2) 481–481. https://doi.org/10.1093/jmammal/gyac001..
Parker, Lillian D., Quinta, Jessica D., Rivera, Isabel, Cypher, Brian L., Kelly, Erica C., Campana, Michael G., Fleischer, Robert C., Boarman, Ryan, Boarman, William I., and Maldonado, Jesus E. 2022. "Genetic analyses are more sensitive than morphological inspection at detecting the presence of threatened Mojave desert tortoise (Gopherus agassizii) remains in canid scat and raven pellets." Conservation Science and Practice, https://doi.org/10.1111/csp2.12689..
Segura-Trujillo, Cintya A., Ticul Alvarez-Castaneda, Sergio, Castaneda-Rico, Susette, and Maldonado, Jesus E. 2022. "Taxonomic versus ecological prey traits among arthropodophagous bats: implications for surveying trophic partitioning patterns." Journal of mammalogy, https://doi.org/10.1093/jmammal/gyac027..
Smalling, Kelly L., Mosher, Brittany A., Iwanowicz, Luke R., Loftin, Keith A., Boehlke, Adam, Hladik, Michelle L., Muletz‐Wolz, Carly R., Córtes‐Rodríguez, Nandadevi, Femmer, Robin, and Campbell Grant, Evan H. 2022. "Site‐ and Individual‐Level Contaminations Affect Infection Prevalence of an Emerging Infectious Disease of Amphibians." Environmental Toxicology and Chemistry, 41, (3) 781–791. https://doi.org/10.1002/etc.5291..
Speer, Kelly A., Hawkins, Melissa T. R., Flores, Mary Faith C., McGowen, Michael R., Fleischer, Robert C., Maldonado, Jesús E., Campana, Michael G., and Muletz-Wolz, Carly. 2022. "A comparative study of RNA yields from museum specimens, including an optimized protocol for extracting RNA from formalin-fixed specimens." Frontiers in Ecology and Evolution, 10. https://doi.org/10.3389/fevo.2022.953131..
Tavares, Valéria da C., Gardner, Alfred L., McDonough, Molly M., Maldonado, Jesús E., Gutiérrez, Eliécer E., Velazco, Paúl M., and Garbino, Guilherme S. T. 2022. "Historical DNA of rare yellow-eared bats Vampyressa Thomas, 1900 (Chiroptera, Phyllostomidae) clarifies phylogeny and species boundaries within the genus." Systematics and Biodiversity, 20, (1). https://doi.org/10.1080/14772000.2022.2117247..